miRBase entry: 17989255

Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes

PubMed ID 17989255
Authors "Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M"
Journal "Genome Res
Volume 17
Pages 1865-1879

There are 102 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
dme-mir-1 MI0000116 107366 chr2L 20487441 20487531 + High
dme-mir-2a-1 MI0000117 11749 chr2L 19569897 19569972 - High
dme-mir-2a-2 MI0000118 16640 chr2L 19569490 19569561 - High
dme-mir-2b-1 MI0000119 9716 chr2L 8258616 8258692 - High
dme-mir-2b-2 MI0000120 10189 chr2L 19570182 19570264 - High
dme-mir-3 MI0000121 3394 chr2R 19661595 19661663 - High
dme-mir-4 MI0000122 4306 chr2R 19661289 19661369 - High
dme-mir-5 MI0000123 4680 chr2R 19661158 19661226 - High
dme-mir-6-1 MI0000124 1126 chr2R 19661003 19661084 - High
dme-mir-6-2 MI0000125 1086 chr2R 19660869 19660942 - High
dme-mir-6-3 MI0000126 1200 chr2R 19660716 19660795 - High
dme-mir-7 MI0000127 4215 chr2R 20606067 20606154 + High
dme-mir-8 MI0000128 57465 chr2R 16831432 16831518 + High
dme-mir-9a MI0000129 8876 chr3L 19565131 19565208 + High
dme-mir-10 MI0000130 6448 chr3R 6809506 6809582 - High
dme-mir-11 MI0000131 14078 chr3R 21622497 21622571 - High
dme-mir-12 MI0000132 16374 chrX 15509473 15509546 + High
dme-mir-13a MI0000133 856 chr3R 15417542 15417616 - High
dme-mir-13b-1 MI0000134 7335 chr3R 15417408 15417475 - High
dme-mir-13b-2 MI0000135 7665 chrX 9091230 9091299 + High
dme-mir-14 MI0000136 52805 chr2R 9553762 9553824 + High
dme-mir-263a MI0000343 4635 chr2L 11953410 11953503 - -
dme-mir-184 MI0000354 120037 chr2R 13329402 13329501 - High
dme-mir-274 MI0000355 2369 chr3L 11656918 11657017 + High
dme-mir-275 MI0000356 3405 chr2L 7425795 7425892 + High
dme-mir-92a MI0000357 7392 chr3R 25646506 25646600 + High
dme-mir-219 MI0000358 256 chr3L 17315006 17315105 + High
dme-mir-276a MI0000359 51649 chr3L 10365228 10365325 + High
dme-mir-277 MI0000360 22508 chr3R 10100022 10100121 + High
dme-mir-278 MI0000361 4144 chr2R 15657066 15657163 + High
dme-mir-133 MI0000362 1370 chr2L 20616617 20616714 + High
dme-mir-279 MI0000363 14159 chr3R 29215585 29215684 + High
dme-mir-33 MI0000364 5938 chr3L 19797961 19798059 + High
dme-mir-281-1 MI0000366 2379 chr2R 12170373 12170462 - High
dme-mir-282 MI0000367 21363 chr3L 3251022 3251118 + High
dme-mir-283 MI0000368 2309 chrX 15507956 15508055 + High
dme-mir-284 MI0000369 1969 chr3R 12551515 12551614 - High
dme-mir-281-2 MI0000370 12674 chr2R 12170153 12170244 - High
dme-mir-34 MI0000371 32763 chr3R 10100936 10101034 + High
dme-mir-124 MI0000373 23619 chr2L 17566370 17566469 + High
dme-mir-79 MI0000374 20569 chr2L 16698554 16698650 + High
dme-mir-276b MI0000375 14614 chr3L 10319785 10319883 + High
dme-mir-210 MI0000376 2903 chrX 18128219 18128318 + High
dme-mir-285 MI0000377 2297 chr3L 11946093 11946191 - High
dme-mir-100 MI0000378 245 chr2L 18471434 18471533 + High
dme-mir-92b MI0000379 7352 chr3R 25651398 25651497 + High
dme-mir-286 MI0000380 5368 chr2R 19661422 19661521 - High
dme-mir-87 MI0000382 543 chr2L 9950418 9950516 - High
dme-mir-263b MI0000383 551 chr3L 15843406 15843495 - High
dme-bantam MI0000387 54356 chr3L 642208 642288 + High
dme-mir-303 MI0000409 390 chrX 4366179 4366248 - High
dme-mir-31b MI0000410 1314 chrX 8993305 8993431 - High
dme-mir-304 MI0000411 1840 chrX 15508959 15509046 + High
dme-mir-305 MI0000412 12557 chr2L 7425972 7426044 + High
dme-mir-9c MI0000413 13645 chr2L 16697924 16698015 + High
dme-mir-306 MI0000414 12857 chr2L 16698404 16698488 + High
dme-mir-9b MI0000415 5894 chr2L 16698744 16698834 + High
dme-let-7 MI0000416 7587 chr2L 18472034 18472111 + High
dme-mir-125 MI0000417 2646 chr2L 18472315 18472424 + High
dme-mir-307a MI0000418 1366 chr2R 9621251 9621338 - High
dme-mir-308 MI0000419 17479 chr2R 14215802 14215864 - High
dme-mir-31a MI0000420 7133 chr2R 17783795 17783886 - High
dme-mir-309 MI0000421 2231 chr2R 19661706 19661774 - High
dme-mir-310 MI0000422 2081 chr2R 20583752 20583840 - High
dme-mir-311 MI0000423 1835 chr2R 20583877 20583960 - High
dme-mir-312 MI0000424 3486 chr2R 20584056 20584121 - High
dme-mir-313 MI0000425 1036 chr2R 20584190 20584260 - High
dme-mir-314 MI0000426 653 chr3L 11773012 11773101 + High
dme-mir-315 MI0000427 3566 chr3L 18860971 18861054 + High
dme-mir-316 MI0000428 506 chr3L 21668714 21668802 - High
dme-mir-317 MI0000429 10951 chr3R 10091126 10091217 + High
dme-mir-318 MI0000430 5916 chr3R 10408302 10408369 + High
dme-mir-2c MI0000431 2932 chr3R 15417744 15417845 - High
dme-mir-iab-4 MI0000432 799 chr3R 16856275 16856342 + High
dme-mir-190 MI0005808 1478 chr3L 8571799 8571898 + High
dme-mir-193 MI0005809 1103 chr3L 21574014 21574121 + High
dme-mir-957 MI0005811 3995 chr3L 22518196 22518291 - High
dme-mir-958 MI0005812 2944 chr3L 22669289 22669380 - High
dme-mir-375 MI0005813 1502 chr2L 857542 857632 + High
dme-mir-959 MI0005814 352 chr2L 5640940 5641037 + High
dme-mir-964 MI0005819 441 chr2L 5642102 5642201 + -
dme-mir-932 MI0005820 569 chr2L 6902062 6902152 + High
dme-mir-965 MI0005821 3072 chr2L 243035 243141 - High
dme-mir-968 MI0005825 952 chr2L 13747748 13747839 - High
dme-mir-969 MI0005826 32 chrX 18124357 18124450 + High
dme-mir-970 MI0005827 1258 chrX 12636336 12636430 + High
dme-mir-971 MI0005828 75 chrX 13062072 13062167 + High
dme-mir-977 MI0005834 1473 chrX 19559022 19559120 + High
dme-mir-980 MI0005837 640 chrX 280172 280269 - High
dme-mir-981 MI0005838 1912 chrX 1788861 1788957 - High
dme-mir-927 MI0005843 583 chrX 15965947 15966038 - High
dme-mir-987 MI0005846 1638 chr2R 9313023 9313116 - -
dme-mir-988 MI0005847 4665 chr2R 12158872 12158970 - High
dme-mir-137 MI0005849 94 chr2R 16065254 16065344 - High
dme-mir-929 MI0005853 188 chr3R 4295369 4295456 + High
dme-mir-994 MI0005855 3809 chr3R 10408137 10408227 + High
dme-mir-995 MI0005856 4087 chr3R 20735923 20736012 + High
dme-mir-996 MI0005857 19925 chr3R 29217184 29217280 + -
dme-mir-252 MI0005858 7388 chr3R 13464219 13464311 - High
dme-mir-998 MI0005860 2200 chr3R 21621879 21622021 - High
dme-mir-999 MI0005861 3574 chr3R 21798227 21798331 - High
dme-mir-1000 MI0005862 727 chr3R 25588859 25588958 - High



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