Stem-loop dme-mir-987

Accession

MI0005846

Description

Drosophila melanogaster dme-mir-987 precursor miRNA mir-987

Gene
family

RF02009; mir-987

Literature search

2 open access papers mention dme-mir-987
(8 sentences)

Sequence

190893 reads, 1638 reads per million, 44 experiments

uguuggacuguguuUAAAGUAAAUAGUCUGGAUUGAUGaaaguugcauucgagaauucAUCAACAGGCAUUUACUUCAacugcaguuugaacaa
((((((((((((((..((((((((.(((((..((((((((..(((....)))...))))))))))))))))))))).))).))))))).)))).

Structure

-    -       -   UA        A     GA        -ag   c 
 uguu ggacugu guu  AAGUAAAU GUCUG  UUGAUGaa   uug a
 |||| ||||||| |||  |||||||| |||||  ||||||||   |||  
 acaa uuugacg caA  UUCAUUUA CGGAC  AACUAcuu   agc u
a    g       u   -C        -     --        aag   u 

Annotation confidence Not enough data

Genome context

chr2R: 9313023-9313116 [-]

Mature dme-miR-987-5p

• Accession: MIMAT0005504
• Description: Drosophila melanogaster dme-miR-987-5p mature miRNA
• Sequence: 15 - UAAAGUAAAUAGUCUGGAUUGAUG - 38
• Evidence: experimental ; 454 [1-2], Illumina [2]

Mature dme-miR-987-3p

• Accession: MIMAT0020885
• Description: Drosophila melanogaster dme-miR-987-3p mature miRNA
• Sequence: 59 - AUCAACAGGCAUUUACUUCA - 78
• Evidence: not_experimental

References

1. PubMed ID: 17989254
   Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
   "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
   "Genome Res (2007) 17:1850-1864


2. PubMed ID: 17989255
   Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes
   "Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M"
   "Genome Res (2007) 17:1865-1879