Accession
MI0005857
Description
Drosophila melanogaster
dme-mir-996 precursor miRNA mir-996
Gene
family?
family?
RF00948;
mir-996
Literature search
4 open access papers mention dme-mir-996
(121 sentences)
(121 sentences)
Sequence
676731
reads,
17161
reads per million, 49 experiments
ucugacucuauuuugucgGCGAACAUGGAUCUAGUGCACGgugguucaugauuaaguucgUGACUAGAUUUCAUGCUCGUCUauuaaguugggucag
.(((((((.((((.((.(((((.((((((((((((.((((((((((...)))))...))))))))))).)))))).))))).)).)))).)))))))
.(((((((.((((.((.(((((.((((((((((((.((((((((((...)))))...))))))))))).)))))).))))).)).)))).)))))))
Structure
u u u c A - G --- c cugacuc auuu gu gGCGA CAUGGA UCUAGU CACGg ugguu ||||||| |||| || ||||| |||||| |||||| ||||| ||||| a gacuggg ugaa ua CUGCU GUACUU AGAUCA GUgcu auuag - u u U C U - uga u
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr3R: 29217184-29217280 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dme-mir-996
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-996-3p
| Accession | MIMAT0005515 |
| Description | Drosophila melanogaster dme-miR-996-3p mature miRNA |
| Sequence | 61 - UGACUAGAUUUCAUGCUCGUCU - 82 |
| Evidence |
experimental
454 [1-2], Illumina [2] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-996-5p
| Accession | MIMAT0020895 |
| Description | Drosophila melanogaster dme-miR-996-5p mature miRNA |
| Sequence | 19 - GCGAACAUGGAUCUAGUGCACG - 40 |
| Evidence | not_experimental |
| Database links |
|
References
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