Accession
MI0000121
Description
Drosophila melanogaster
dme-mir-3 precursor miRNA mir-3
Gene
family?
family?
RF00716;
mir-3
Literature search
6 open access papers mention dme-mir-3
(8 sentences)
(8 sentences)
Sequence
26987
reads,
3394
reads per million, 44 experiments
gauccugGGAUGCAUCUUGUGCAGUUAUGuuucaaucucacaUCACUGGGCAAAGUGUGUCUCAagauc
((((.((((((((((.((((.((((.((((.........)))).)))).)))).)))))))))).))))
((((.((((((((((.((((.((((.((((.........)))).)))).)))).)))))))))).))))
Structure
c C G U uuc
gauc ugGGAUGCAU UUGU CAGU AUGu a
|||| |||||||||| |||| |||| |||| a
cuag ACUCUGUGUG AACG GUCA Uaca u
a A G C cuc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2R: 19661595-19661663 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dme-mir-3
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-3-3p
| Accession | MIMAT0000108 |
| Description | Drosophila melanogaster dme-miR-3-3p mature miRNA |
| Sequence | 43 - UCACUGGGCAAAGUGUGUCUCA - 64 |
| Evidence |
experimental
cloned [1,3], Northern [1-3], 454 [4-5], Illumina [5] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-3-5p
| Accession | MIMAT0020784 |
| Description | Drosophila melanogaster dme-miR-3-5p mature miRNA |
| Sequence | 8 - GGAUGCAUCUUGUGCAGUUAUG - 29 |
| Evidence | not_experimental |
| Database links |
|
References
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