Accession
MI0000423
Description
Drosophila melanogaster
dme-mir-311 precursor miRNA mir-310
Gene
family?
family?
RF04249;
mir-310
Literature search
7 open access papers mention dme-mir-311
(24 sentences)
(24 sentences)
Sequence
161433
reads,
1835
reads per million, 48 experiments
ucuagaucauuuuuCGGACGGUAUAUGGGUUAAUAUUucauuugucgaauaUAUUGCACAUUCACCGGCCUGAaaauaucaaga
(((.(((.((((((.((.((((..(((.((.((((((((.......))).))))))).)))..)))).)).))))))))).)))
(((.(((.((((((.((.((((..(((.((.((((((((.......))).))))))).)))..)))).)).))))))))).)))
Structure
a c C A AU G U - au ucu gau auuuuu GG CGGU AUG GU AAUAU Uuc u ||| ||| |||||| || |||| ||| || ||||| ||| u aga cua uaaaAG CC GCCA UAC CG UUAUa aag g a - U G CU A - u cu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2R: 20583877-20583960 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from dme-mir-311
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-311-3p
| Accession | MIMAT0000403 |
| Description | Drosophila melanogaster dme-miR-311-3p mature miRNA |
| Sequence | 52 - UAUUGCACAUUCACCGGCCUGA - 73 |
| Evidence |
experimental
cloned [1], Northern [1], 454 [2-3], Illumina [3] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-311-5p
| Accession | MIMAT0020837 |
| Description | Drosophila melanogaster dme-miR-311-5p mature miRNA |
| Sequence | 15 - CGGACGGUAUAUGGGUUAAUAUU - 37 |
| Evidence | not_experimental |
| Database links |
|
References
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