Stem-loop dme-mir-137

Accession

MI0005849

Description

Drosophila melanogaster dme-mir-137 precursor miRNA mir-137

Gene
family

RF00694; mir-137

Literature search

9 open access papers mention dme-mir-137
(57 sentences)

Sequence

3893 reads, 62 reads per million, 46 experiments

caaucuccaauggccACGUGUAUGCUCGUAGCUAUAACcugaaauccaaauguUAUUGCUUGAGAAUACACGUAGuucaccgagauuuguu
.((((((....(((.((((((((.((((.(((.(((((.((.....))...))))).))))))).)))))))).)))....))))))....

Structure

---c      caau   c        G    U   U     --c  a 
    aaucuc    ggc ACGUGUAU CUCG AGC AUAAC   ug a
    ||||||    ||| |||||||| |||| ||| |||||   || a
    uuagag    uuG UGCACAUA GAGU UCG UAUug   ac u
uugu      ccac   A        A    -   U     uaa  c 

Annotation confidence High

Genome context

chr2R: 16065254-16065344 [-]

Mature dme-miR-137-3p

• Accession: MIMAT0005507
• Description: Drosophila melanogaster dme-miR-137-3p mature miRNA
• Sequence: 54 - UAUUGCUUGAGAAUACACGUAG - 75
• Evidence: experimental ; 454 [1-2], Illumina [2]

Mature dme-miR-137-5p

• Accession: MIMAT0020888
• Description: Drosophila melanogaster dme-miR-137-5p mature miRNA
• Sequence: 16 - ACGUGUAUGCUCGUAGCUAUAAC - 38
• Evidence: not_experimental

References

1. PubMed ID: 17989254
   Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
   "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
   "Genome Res (2007) 17:1850-1864


2. PubMed ID: 17989255
   Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes
   "Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M"
   "Genome Res (2007) 17:1865-1879