Accession
MI0000126
Description
Drosophila melanogaster
dme-mir-6-3 precursor miRNA mir-6
Gene
family?
family?
RF00143;
mir-6
Literature search
10 open access papers mention dme-mir-6-3
(35 sentences)
(35 sentences)
Sequence
20873
reads,
1200
reads per million, 36 experiments
caaaaagaAGGGAACGGUUGCUGAUGAUGUAguuugaaacucucacaauuuaUAUCACAGUGGCUGUUCUUUUUuguuug
((((.((((((((((((((((((.((((((((.(((.........))).)))))))))))))))))))))))))).))))
((((.((((((((((((((((((.((((((((.(((.........))).)))))))))))))))))))))))))).))))
Structure
a A u aaa
caaa agaAGGGAACGGUUGCUG UGAUGUAg uug c
|||| |||||||||||||||||| |||||||| ||| u
guuu uUUUUUCUUGUCGGUGAC ACUAUauu aac c
g - u acu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2R: 19660716-19660795 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dme-mir-6-3
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-6-3p
| Accession | MIMAT0000111 |
| Description | Drosophila melanogaster dme-miR-6-3p mature miRNA |
| Sequence | 53 - UAUCACAGUGGCUGUUCUUUUU - 74 |
| Evidence |
experimental
cloned [1,3], Northern [1-2], 454 [4], Illumina [5] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-6-3-5p
| Accession | MIMAT0020789 |
| Description | Drosophila melanogaster dme-miR-6-3-5p mature miRNA |
| Sequence | 9 - AGGGAACGGUUGCUGAUGAUGUA - 31 |
| Evidence | not_experimental |
| Database links |
|
References
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