Accession
MI0000424
Description
Drosophila melanogaster
dme-mir-312 precursor miRNA mir-312
Gene
family?
family?
RF03326;
mir-312
Literature search
10 open access papers mention dme-mir-312
(59 sentences)
(59 sentences)
Sequence
418810
reads,
3039
reads per million, 49 experiments
gauuUGGUUCGUCACAAGGGCAAUUCUgcauuuuuuaacuagUAUUGCACUUGAGACGGCCUGAuu
((((.(((.((((.((((.(((((.(((...........))).))))).)))).))))))).))))
((((.(((.((((.((((.(((((.(((...........))).))))).)))).))))))).))))
Structure
U U A G U cauu
gauu GGU CGUC CAAG GCAAU CUg u
|||| ||| |||| |||| ||||| ||| u
uuAG CCG GCAG GUUC CGUUA gau u
U - A A U caau
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2R: 20584056-20584121 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from dme-mir-312
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-312-3p
| Accession | MIMAT0000404 |
| Description | Drosophila melanogaster dme-miR-312-3p mature miRNA |
| Sequence | 43 - UAUUGCACUUGAGACGGCCUGA - 64 |
| Evidence |
experimental
cloned [1], Northern [1], 454 [2-3], Illumina [3] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-312-5p
| Accession | MIMAT0020838 |
| Description | Drosophila melanogaster dme-miR-312-5p mature miRNA |
| Sequence | 5 - UGGUUCGUCACAAGGGCAAUUCU - 27 |
| Evidence | not_experimental |
| Database links |
|
References
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