Accession
MI0005861
Description
Drosophila melanogaster
dme-mir-999 precursor miRNA mir-999
Gene
family?
family?
RF01943;
mir-999
Literature search
1 open access papers mention dme-mir-999
(1 sentences)
(1 sentences)
Sequence
514232
reads,
3574
reads per million, 49 experiments
aaggaugccgcucaauuaccccgACAUAGUCAUACGGUGAAUGUUguguauuggagaccaaUGUUAACUGUAAGACUGUGUCUcggugguugccagcccagccac
..((.((..(((((((((((..(((((((((.((((((.(((((((.((.......))))))))).)))))).)))))))))..))))))))..))).)).))..
..((.((..(((((((((((..(((((((((.((((((.(((((((.((.......))))))))).)))))).)))))))))..))))))))..))).)).))..
Structure
aa a cc -- cc A G u au gg ug gcu caauuacc gACAUAGUC UACGGU AAUGUUg gu u || || ||| |||||||| ||||||||| |||||| ||||||| || g cc ac cga guuggugg CUGUGUCAG AUGUCA UUGUaac ca g ca g -c cc cU A A - ga
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr3R: 21798227-21798331 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dme-mir-999
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-999-3p
| Accession | MIMAT0005519 |
| Description | Drosophila melanogaster dme-miR-999-3p mature miRNA |
| Sequence | 62 - UGUUAACUGUAAGACUGUGUCU - 83 |
| Evidence |
experimental
454 [1-2], Illumina [2] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-999-5p
| Accession | MIMAT0020899 |
| Description | Drosophila melanogaster dme-miR-999-5p mature miRNA |
| Sequence | 24 - ACAUAGUCAUACGGUGAAUGUU - 45 |
| Evidence | not_experimental |
| Database links |
|
References
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