Accession
MI0000422
Description
Drosophila melanogaster
dme-mir-310 precursor miRNA mir-310
Gene
family?
family?
RF04249;
mir-310
Literature search
18 open access papers mention dme-mir-310
(109 sentences)
(109 sentences)
Sequence
24116
reads,
2081
reads per million, 48 experiments
aacauaaacauuugcAGGGCGGGUCGUGUGUCAGUGUAuuuauaucuuagcuaUAUUGCACACUUCCCGGCCUUUaaauguccaauguu
(((((..(((((((.(((.((((..(((((.(((((((.(((.....))).))))))))))))..)))).))).)))))))...)))))
(((((..(((((((.(((.((((..(((((.(((((((.(((.....))).))))))))))))..)))).))).)))))))...)))))
Structure
-aa c G UC U u u
aacau acauuug AGG CGGG GUGUG CAGUGUA uua a
||||| ||||||| ||| |||| ||||| ||||||| ||| u
uugua uguaaaU UCC GCCC CACAC GUUAUau gau c
acc U G UU - c u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2R: 20583752-20583840 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from dme-mir-310
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-310-3p
| Accession | MIMAT0000402 |
| Description | Drosophila melanogaster dme-miR-310-3p mature miRNA |
| Sequence | 54 - UAUUGCACACUUCCCGGCCUUU - 75 |
| Evidence |
experimental
Northern [1], 454 [2-3], Illumina [3] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-310-5p
| Accession | MIMAT0020836 |
| Description | Drosophila melanogaster dme-miR-310-5p mature miRNA |
| Sequence | 16 - AGGGCGGGUCGUGUGUCAGUGUA - 38 |
| Evidence | not_experimental |
| Database links |
|
References
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