Accession
MI0000122
Description
Drosophila melanogaster
dme-mir-4 precursor miRNA mir-4
Gene
family?
family?
RF03258;
mir-4
Literature search
6 open access papers mention dme-mir-4
(21 sentences)
(21 sentences)
Sequence
27504
reads,
4306
reads per million, 42 experiments
uugcaauuaguuuCUUUGGUCGUCCAGCCUUAGGUGAuuuuuccggucAUAAAGCUAGACAACCAUUGAaguucguugugg
..(((((.((((((..((((.(((.(((.((..((((((.....)))))).))))).))).))))..)))))).)))))..
..(((((.((((((..((((.(((.(((.((..((((((.....)))))).))))).))).))))..)))))).)))))..
Structure
uu u UU C C C AG u gcaau aguuuC UGGU GUC AGC UU GUGAuu u ||||| |||||| |||| ||| ||| || |||||| u uguug uugaAG ACCA CAG UCG AA UAcugg c gg c UU A A - -A c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2R: 19661289-19661369 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dme-mir-4
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-4-3p
| Accession | MIMAT0000109 |
| Description | Drosophila melanogaster dme-miR-4-3p mature miRNA |
| Sequence | 49 - AUAAAGCUAGACAACCAUUGA - 69 |
| Evidence |
experimental
cloned [1,3], Northern [1-3], 454 [4-5], Illumina [5] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-4-5p
| Accession | MIMAT0020785 |
| Description | Drosophila melanogaster dme-miR-4-5p mature miRNA |
| Sequence | 14 - CUUUGGUCGUCCAGCCUUAGGUGA - 37 |
| Evidence | not_experimental |
| Database links |
|
References
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