Accession
MI0000429
Description
Drosophila melanogaster
dme-mir-317 precursor miRNA mir-317
Gene
family?
family?
RF00720;
mir-317
Literature search
11 open access papers mention dme-mir-317
(23 sentences)
(23 sentences)
Sequence
508336
reads,
10951
reads per million, 49 experiments
augcaacugccauUGGGAUACACCCUGUGCUCGCUuugaaugaaaugcaagcaagUGAACACAGCUGGUGGUAUCCAGUggccguuuggcau
(((((((.(((((((((...(((((((((.((((((.(..((.....))..))))))).)))))..))))...))))))))).)))..))))
(((((((.(((((((((...(((((((((.((((((.(..((.....))..))))))).)))))..))))...))))))))).)))..))))
Structure
-- u AUA -- C u aa a
augc aac gccauUGGG CACC CUGUG UCGCUu g ug a
|||| ||| ||||||||| |||| ||||| |||||| | || a
uacg uug cggUGACCU GUGG GACAC AGUgaa c ac u
gu c AUG UC A - ga g
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr3R: 10091126-10091217 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dme-mir-317
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-317-3p
| Accession | MIMAT0000409 |
| Description | Drosophila melanogaster dme-miR-317-3p mature miRNA |
| Sequence | 56 - UGAACACAGCUGGUGGUAUCCAGU - 79 |
| Evidence |
experimental
cloned [1], 454 [2-3], Illumina [3] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-317-5p
| Accession | MIMAT0020843 |
| Description | Drosophila melanogaster dme-miR-317-5p mature miRNA |
| Sequence | 14 - UGGGAUACACCCUGUGCUCGCU - 35 |
| Evidence | not_experimental |
| Database links |
|
References
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