Accession
MI0000414
Description
Drosophila melanogaster
dme-mir-306 precursor miRNA mir-306
Gene
family?
family?
RF00858;
mir-306
Literature search
5 open access papers mention dme-mir-306
(18 sentences)
(18 sentences)
Sequence
394168
reads,
7522
reads per million, 49 experiments
guccacucgauggcUCAGGUACUUAGUGACUCUCAAugcuuuugacauuuuGGGGGUCACUCUGUGCCUGUGCugccagugggac
.((((((.(.((((.(((((((..(((((((((((((((....).)))..)))))))))))..))))))).))))).))))))..
.((((((.(.((((.(((((((..(((((((((((((((....).)))..)))))))))))..))))))).))))).))))))..
Structure
-g c a U UU -- - u uccacu g uggc CAGGUAC AGUGACUCUCA Aug c u |||||| | |||| ||||||| ||||||||||| ||| | ggguga c guCG GUCCGUG UCACUGGGGGu uac g u ca c - U UC uu a u
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
miR-306 was identified and ends mapped by cloning. Reference [1] also identified a less predominantly expressed miR from the opposite arm of the precursor, designated miR-306* here
Genome context
chr2L: 16698404-16698488 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from dme-mir-306
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-306-5p
| Accession | MIMAT0000393 |
| Description | Drosophila melanogaster dme-miR-306-5p mature miRNA |
| Sequence | 15 - UCAGGUACUUAGUGACUCUCAA - 36 |
| Evidence |
experimental
cloned [1], 454 [2-3], Illumina [3] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-306-3p
| Accession | MIMAT0000394 |
| Description | Drosophila melanogaster dme-miR-306-3p mature miRNA |
| Sequence | 52 - GGGGGUCACUCUGUGCCUGUGC - 73 |
| Evidence |
experimental
cloned [1], 454 [2-3], Illumina [3] |
| Database links |
|
References
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