Accession
MI0000377
Description
Drosophila melanogaster
dme-mir-285 precursor miRNA
Literature search
8 open access papers mention dme-mir-285
(13 sentences)
(13 sentences)
Sequence
63024
reads,
1771
reads per million, 46 experiments
ucgaaucgaagaACUGAGAUCGAUUGGUGCAUAGAuaucaggagaacccacucaauuuaacucUAGCACCAUUCGAAAUCAGUGCuuuugauaagaaac
((..(((((((.(((((..((((.((((((.((((......(((......)))........)))))))))).))))..)))))..)))))))..))...
((..(((((((.(((((..((((.((((((.((((......(((......)))........)))))))))).))))..)))))..)))))))..))...
Structure
--- ga -a GA U A --uaucag aa uc aucgaag ACUGA UCGA UGGUGC UAGA gag c || ||||||| ||||| |||| |||||| |||| ||| ag uaguuuu UGACU AGCU ACCACG AUcu cuc c caa aa CG AA U - caauuuaa ac
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
miR-285 was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the ends of the excised miRNA by cloning.
Genome context
chr3L: 11946093-11946191 [-]
Database links
Mature dme-miR-285-3p
| Accession | MIMAT0000356 |
| Description | Drosophila melanogaster dme-miR-285-3p mature miRNA |
| Sequence | 64 - UAGCACCAUUCGAAAUCAGUGC - 85 |
| Evidence |
experimental
cloned [2], 454 [3], Illumina [4] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-285-5p
| Accession | MIMAT0020817 |
| Description | Drosophila melanogaster dme-miR-285-5p mature miRNA |
| Sequence | 13 - ACUGAGAUCGAUUGGUGCAUAGA - 35 |
| Evidence | not_experimental |
| Database links |
|
References
|
