Accession
MI0000125
Description
Drosophila melanogaster
dme-mir-6-2 precursor miRNA mir-6
Gene
family?
family?
RF00143;
mir-6
Literature search
8 open access papers mention dme-mir-6-2
(33 sentences)
(33 sentences)
Sequence
18732
reads,
1086
reads per million, 38 experiments
uaacccaAGGGAACUUCUGCUGCUGAUAUAuuauugaaaaacuacuaUAUCACAGUGGCUGUUCUUUUUgguug
(((((.((((((((..((((((.(((((((.((((....)).)).)))))))))))))..)))))))).)))))
(((((.((((((((..((((((.(((((((.((((....)).)).)))))))))))))..)))))))).)))))
Structure
c UU C u - g
uaacc aAGGGAAC CUGCUG UGAUAUA ua uu a
||||| |||||||| |||||| ||||||| || ||
guugg UUUUCUUG GGUGAC ACUAUau au aa a
U UC - c c a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2R: 19660869-19660942 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dme-mir-6-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-6-3p
| Accession | MIMAT0000111 |
| Description | Drosophila melanogaster dme-miR-6-3p mature miRNA |
| Sequence | 48 - UAUCACAGUGGCUGUUCUUUUU - 69 |
| Evidence |
experimental
cloned [1,3], Northern [1-2], 454 [4], Illumina [5] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-6-2-5p
| Accession | MIMAT0020788 |
| Description | Drosophila melanogaster dme-miR-6-2-5p mature miRNA |
| Sequence | 8 - AGGGAACUUCUGCUGCUGAUAUA - 30 |
| Evidence | not_experimental |
| Database links |
|
References
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