Stem-loop cqu-mir-2941-2

Accession

MI0013623

Description

Culex quinquefasciatus cqu-mir-2941-2 precursor miRNA

Literature search

1 open access papers mention cqu-mir-2941-2
(11 sentences)

Sequence

guUGAAUUUCGCUGGAGUUCUGCCGGAuugcauugacgauuggaaauuugUAGUACGGCUAGAACUCCACGGacauucgac
(((((((((((.(((((((((((((.((((((................)))))).)))).))))))))))))).)))))))

Structure

       -    C         -    G      uugacga 
guUGAAU UUCG UGGAGUUCU GCCG Auugca       u
||||||| |||| ||||||||| |||| ||||||        
cagcuua aGGC ACCUCAAGA CGGC UGAUgu       u
       c    -         U    A      uuaaagg 

Annotation confidence Low

Genome context

supercont3.5: 753788-753868 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cqu-mir-2941-2

Mature cqu-miR-2941-3p

• Accession: MIMAT0014435
• Description: Culex quinquefasciatus cqu-miR-2941-3p mature miRNA
• Sequence: 51 - UAGUACGGCUAGAACUCCACGG - 72
• Evidence: experimental ; Illumina [1]

Mature cqu-miR-2941-2-5p

• Accession: MIMAT0016971
• Description: Culex quinquefasciatus cqu-miR-2941-2-5p mature miRNA
• Sequence: 3 - UGAAUUUCGCUGGAGUUCUGCCGGA - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119