miRBase entry: cqu-mir-252-1

Stem-loop cqu-mir-252-1


Accession
MI0013576
Description
Culex quinquefasciatus cqu-mir-252-1 precursor miRNA
Gene family
MIPF0000285; mir-252

Literature search
2 open access papers mention cqu-mir-252-1
(12 sentences)

Sequence

gaauucuuuaCUAAGUACUAGUGCCGCAGGAGagauuugaaccCCUGCUGCCCAAGUGCUUAUCGaagagu
..(((((((..((((((((.(.((.(((((.............))))).)).).))))))))..)))))))

Structure
ga       aC        A U  C     AGaga 
  auucuuu  UAAGUACU G GC GCAGG     u
  |||||||  |||||||| | || |||||     u
  ugagaaG  AUUCGUGA C CG CGUCC     u
--       CU        A C  U     ccaag 


Annotation confidence Not enough data
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Genome context
supercont3.1787: 6797-6867 [-]

Database links

Mature cqu-miR-252-5p

Accession MIMAT0014373
Description Culex quinquefasciatus cqu-miR-252-5p mature miRNA
Sequence 11 - CUAAGUACUAGUGCCGCAGGAG - 32
Evidence experimental
Illumina [1]

Mature cqu-miR-252-3p

Accession MIMAT0014374
Description Culex quinquefasciatus cqu-miR-252-3p mature miRNA
Sequence 44 - CCUGCUGCCCAAGUGCUUAUCG - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119