miRBase entry: cqu-mir-305

Stem-loop cqu-mir-305

Accession

MI0013582

Description

Culex quinquefasciatus cqu-mir-305 precursor miRNA

Sequence

aaugucacaugucuAUUGUACUUCAUCAGGUGCUCUgguugcuuucgauaccCGGCACAUGUUGGAGUACACuuaaugugcugacagu
..((((((((((..(.(((((((((.((.(((((..(((..(....)..))).))))).)).))))))))).)..))))).)))))..

Structure

aa     -     cu U         U  G     CU   ug u 
  uguca caugu  A UGUACUUCA CA GUGCU  ggu  c u
  ||||| |||||  | ||||||||| || |||||  |||  |  
  acagu gugua  u ACAUGAGGU GU CACGG  cca  g u
ug     c     au C         U  A     -C   ua c

Annotation confidence Not enough data

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Genome context

supercont3.291: 339120-339207 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cqu-mir-305

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cqu-miR-305-5p

Accession	MIMAT0014382
Description	Culex quinquefasciatus cqu-miR-305-5p mature miRNA
Sequence	15 - AUUGUACUUCAUCAGGUGCUCU - 36
Evidence	experimental Illumina [1]

Mature cqu-miR-305-3p

Accession	MIMAT0014383
Description	Culex quinquefasciatus cqu-miR-305-3p mature miRNA
Sequence	53 - CGGCACAUGUUGGAGUACAC - 72
Evidence	experimental Illumina [1]

References

PubMed ID: 20167119
Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
BMC Genomics (2010) 11:119