Stem-loop cqu-let-7

Accession

MI0013570

Description

Culex quinquefasciatus cqu-let-7 precursor miRNA

Literature search

1 open access papers mention cqu-let-7
(2 sentences)

Sequence

ucgcugcucccacguUGAGGUAGUUGGUUGUAUAGUauuaaaaauucaauaucuaCUAUGCAAUCCGCUAGCUUAACuugugagggcgccu
..((.((((.(((((((((.((((.((((((((((((................)))))))))))).)))).))))))..))).))))))..

Structure

uc  u    c   --      G    U            uuaaaaa 
  gc gcuc cac  guUGAG UAGU GGUUGUAUAGUa       u
  || |||| |||  |||||| |||| ||||||||||||        
  cg cggg gug  CAAUUC AUCG CUAACGUAUCau       u
uc  -    a   uu      G    C            cuauaac 

Annotation confidence Low

Genome context

supercont3.4: 280595-280685 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cqu-let-7

Mature cqu-let-7-5p

• Accession: MIMAT0014366
• Description: Culex quinquefasciatus cqu-let-7-5p mature miRNA
• Sequence: 16 - UGAGGUAGUUGGUUGUAUAGU - 36
• Evidence: experimental ; Illumina [1]

Mature cqu-let-7-3p

• Accession: MIMAT0014367
• Description: Culex quinquefasciatus cqu-let-7-3p mature miRNA
• Sequence: 56 - CUAUGCAAUCCGCUAGCUUAAC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119