Stem-loop cqu-bantam

Accession

MI0013610

Description

Culex quinquefasciatus cqu-bantam precursor miRNA

Literature search

1 open access papers mention cqu-bantam
(3 sentences)

Sequence

agaaCCGGUUUUCAUUUUCGAUCUGACuuauuugauuuaacagagUGAGAUCAUUUUGAAAGCUGAuuuu
.....(((((((((.....(((((.((((..(((...)))..)))).)))))....))))))))).....

Structure

agaaC         UUUUC     G    au   a 
     CGGUUUUCA     GAUCU ACuu  uug  
     |||||||||     ||||| ||||  ||| u
     GUCGAAAGU     CUAGA Ugag  aau  
uuuuA         -UUUA     G    ac   u 

Annotation confidence Low

Genome context

supercont3.65: 199694-199763 [-]

Mature cqu-bantam-5p

• Accession: MIMAT0014420
• Description: Culex quinquefasciatus cqu-bantam-5p mature miRNA
• Sequence: 5 - CCGGUUUUCAUUUUCGAUCUGAC - 27
• Evidence: experimental ; Illumina [1]

Mature cqu-bantam-3p

• Accession: MIMAT0014421
• Description: Culex quinquefasciatus cqu-bantam-3p mature miRNA
• Sequence: 46 - UGAGAUCAUUUUGAAAGCUGA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119