Stem-loop cqu-mir-306

Accession

MI0013626

Description

Culex quinquefasciatus cqu-mir-306 precursor miRNA

Sequence

uuggcUCAGGUACUGAGUGACUCUCAGcgugauaccauuuccaguuccugugagcaccucgguaccuuggcc
..((((.((((((((((((.(((.(((..((..........))....))).))))).)))))))))).))))

Structure

uu    C          -  A   U   --cg  auac 
  ggcU AGGUACUGAG UG CUC CAG    ug    c
  |||| |||||||||| || ||| |||    ||     
  ccgg uccauggcuc ac gag guc    ac    a
--    u          c  -   u   cuug  cuuu 

Annotation confidence Not enough data

Genome context

supercont3.83: 80431-80502 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cqu-mir-306

Mature cqu-miR-306

• Accession: MIMAT0014438
• Description: Culex quinquefasciatus cqu-miR-306 mature miRNA
• Sequence: 6 - UCAGGUACUGAGUGACUCUCAG - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119