Stem-loop cqu-mir-281-1

Accession

MI0013564

Description

Culex quinquefasciatus cqu-mir-281-1 precursor miRNA

Literature search

1 open access papers mention cqu-mir-281-1
(1 sentences)

Sequence

uucugcaguuucgaaugugaaaauaAAGAGAGCUAUCCGUCGACAGUagggauaugauucacUGUCAUGGAAUUGCUCUCUUUauguacaauucgauauucaacagu
..(((.(((.(((((((((...(((((((((((..(((((.((((((.((........)))))))))))))...))))))))))).))).)))))).)))...))).

Structure

uu   --c   u      -   aaa           -UA     C      a  gau 
  cug   agu ucgaau gug   auaAAGAGAGC   UCCGU GACAGU gg   a
  |||   ||| |||||| |||   |||||||||||   ||||| |||||| ||    
  gac   uua agcuua cau   uaUUUCUCUCG   AGGUA CUGUca cu   u
-u   aac   u      a   --g           UUA     -      -  uag 

Annotation confidence Not enough data

Genome context

supercont3.1661: 13232-13338 [+]

Mature cqu-miR-281-5p

• Accession: MIMAT0014358
• Description: Culex quinquefasciatus cqu-miR-281-5p mature miRNA
• Sequence: 26 - AAGAGAGCUAUCCGUCGACAGU - 47
• Evidence: experimental ; Illumina [1]

Mature cqu-miR-281-3p

• Accession: MIMAT0014359
• Description: Culex quinquefasciatus cqu-miR-281-3p mature miRNA
• Sequence: 63 - UGUCAUGGAAUUGCUCUCUUU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119