Stem-loop aga-mir-276-1

Accession

MI0001614

Description

Anopheles gambiae aga-mir-276-1 precursor miRNA

Literature search

4 open access papers mention aga-mir-276-1
(7 sentences)

Sequence

646328 reads, 47169.0 reads per million, 24 experiments

ggugacugccaucAGCGAGGUAUAGAGUUCCUACGguaaucgauugaaacuuugUAGGAACUUCAUACCGUGCUCUuggauagccguuuacc
(((((((((((..((((.(((((.((((((((((((...((....))....)))))))))))).))))).))))..))).)))....)))))

Structure

     ----   -   uc    A     A            -uaa  g 
gguga    cug cca  AGCG GGUAU GAGUUCCUACGg    uc a
|||||    ||| |||  |||| ||||| ||||||||||||    ||  
ccauu    gau ggu  UCGU CCAUA UUCAAGGAUguu    ag u
     ugcc   a   UC    G     C            ucaa  u 

Annotation confidence High

Comments

miR-276-5p and miR-276-3p were cloned in Anopheles stephensi and mappedt to the A. gambiae genome [1].

Genome context

ref|NC_064601.1|: 87872543-87872634 [+]

Mature aga-miR-276-1-5p

• Accession: MIMAT0001509
• Description: Anopheles gambiae aga-miR-276-1-5p mature miRNA
• Sequence: 14 - AGCGAGGUAUAGAGUUCCUACG - 35
• Evidence: not_experimental

Mature aga-miR-276-1-3p

• Accession: MIMAT0006782
• Description: Anopheles gambiae aga-miR-276-1-3p mature miRNA
• Sequence: 55 - UAGGAACUUCAUACCGUGCUCU - 76
• Evidence: not_experimental

References

1. PubMed ID: 18500992
   Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
   Mead EA, Tu Z
   BMC Genomics (2008) 9:244