Stem-loop aga-mir-1175

Accession

MI0006238

Description

Anopheles gambiae aga-mir-1175 precursor miRNA

Literature search

4 open access papers mention aga-mir-1175
(7 sentences)

Sequence

gauauggaauaaguggaguaguggucucaucgcuuagcuucagaaaagUGAGAUUCUACUUCUCCGACUUAAuucauauc
((((((((.(((((((((.(((((..((.((((((..(....)..))))))))..))))).)))).))))).))))))))

Structure

        a     -    u     uc  a      ag u 
gauaugga uaagu ggag agugg  uc ucgcuu  c u
|||||||| ||||| |||| |||||  || ||||||  |  
cuauacuu AUUCA CCUC UCAUC  AG AGUgaa  g c
        A     G    U     UU  -      aa a 

Annotation confidence Low

Genome context

chr2R: 9129786-9129865 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from aga-mir-1175

Mature aga-miR-1175

• Accession: MIMAT0005525
• Description: Anopheles gambiae aga-miR-1175 mature miRNA
• Sequence: 49 - UGAGAUUCUACUUCUCCGACUUAA - 72
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17933784
   Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion
   "Winter F, Edaye S, Huttenhofer A, Brunel C"
   "Nucleic Acids Res (2007) 35:6953-6962