Accession
MI0013585
Description
Culex quinquefasciatus
cqu-mir-100 precursor miRNA
Sequence
aacagcauuucccauuugcgggAACCCGUAGAUCCGAACUUGUGcugcccuuuuuacacguuaCAAGGCCGGAUAUAUGGGAUCcugccgauggguggaaaaagcaucga
....((.(((((((((.((((((.((((((.(((((..((((((.((...........)).))))))..))))).)))))).)))))).))))))....))).)).....
....((.(((((((((.((((((.((((((.(((((..((((((.((...........)).))))))..))))).)))))).)))))).))))))....))).)).....
Structure
-aaca a ---- u A G AA c cccu
gc uuu cccauu gcgggA CCCGUA AUCCG CUUGUG ug u
|| ||| |||||| |||||| |||||| ||||| |||||| || u
cg aaa ggguag cgucCU GGGUAU UAGGC GAACau gc u
agcua a aggu c A A CG u acau
Annotation confidence
Low
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Genome context
supercont3.4: 271392-271501 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cqu-mir-100
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cqu-miR-100-5p
| Accession | MIMAT0014387 |
| Description | Culex quinquefasciatus cqu-miR-100-5p mature miRNA |
| Sequence | 23 - AACCCGUAGAUCCGAACUUGUG - 44 |
| Evidence |
experimental
Illumina [1] |
Mature cqu-miR-100-3p
| Accession | MIMAT0014388 |
| Description | Culex quinquefasciatus cqu-miR-100-3p mature miRNA |
| Sequence | 64 - CAAGGCCGGAUAUAUGGGAUC - 84 |
| Evidence |
experimental
Illumina [1] |
References
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