Stem-loop aae-mir-286b-2

Accession

MI0013520

Description

Aedes aegypti aae-mir-286b-2 precursor miRNA

Literature search

3 open access papers mention aae-mir-286b-2
(7 sentences)

Sequence

118412 reads, 715.0 reads per million, 78 experiments

aaguccuggGGCGAUUGUCGGCUUAGUCGCUguaucauuucaacugcugugcaguucuucgcuagUGACUAGACCGAACACUCGUAUCCCaggccuu
(((.((((((((((.((((((.((((((((((.........((((((...))))))......)))))))))).))).))).))))..)))))).)))

Structure

   u      --    U   -   C          uaucauuuc      u 
aag ccuggG  GCGA UGU CGG UUAGUCGCUg         aacugc  
||| ||||||  |||| ||| ||| ||||||||||         |||||| g
uuc ggaCCC  UGCU ACA GCC GAUCAGUgau         uugacg  
   c      UA    C   A   A          ---cgcuuc      u 

Annotation confidence High

Genome context

ref|NW_001811355.1|: 93476-93572 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from aae-mir-286b-2

Mature aae-miR-286b-5p

• Accession: MIMAT0057363
• Description: Aedes aegypti aae-miR-286b-5p mature miRNA
• Sequence: 10 - GGCGAUUGUCGGCUUAGUCGCU - 31
• Evidence: experimental ; 454 [1]

Mature aae-miR-286b-3p

• Accession: MIMAT0014313
• Description: Aedes aegypti aae-miR-286b-3p mature miRNA
• Sequence: 66 - UGACUAGACCGAACACUCGUAUCCC - 90
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581