Stem-loop aae-mir-286a

Accession

MI0013521

Description

Aedes aegypti aae-mir-286a precursor miRNA

Literature search

2 open access papers mention aae-mir-286a
(3 sentences)

Sequence

5300 reads, 55.0 reads per million, 75 experiments

aucguuauuuggGGCGAUUGUCGGACUAGUCGCUGcguacaaaacggaacuauuucaacuagUGACUAGACCGAACACUCGCGUCCUaaagcacgau
(((((..((((((((((.((((((.((((((((((.((...................)))))))))))).))).))).))))..))))))..)))))

Structure

     ua      --    U   -   A          c  acaaaacg 
aucgu  uuuggG  GCGA UGU CGG CUAGUCGCUG gu        g
|||||  ||||||  |||| ||| ||| |||||||||| ||        a
uagca  aaaUCC  CGCU ACA GCC GAUCAGUgau ca        a
     cg      UG    C   A   A          -  acuuuauc 

Annotation confidence High

Genome context

ref|NW_001811201.1|: 824995-825091 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from aae-mir-286a

Mature aae-miR-286a-5p

• Accession: MIMAT0057364
• Description: Aedes aegypti aae-miR-286a-5p mature miRNA
• Sequence: 13 - GGCGAUUGUCGGACUAGUCGCUG - 35
• Evidence: experimental ; 454 [1]

Mature aae-miR-286a-3p

• Accession: MIMAT0014314
• Description: Aedes aegypti aae-miR-286a-3p mature miRNA
• Sequence: 63 - UGACUAGACCGAACACUCGCGUCCU - 87
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581