Stem-loop aae-mir-263b

Accession

MI0013515

Description

Aedes aegypti aae-mir-263b precursor miRNA

Gene family

MIPF0000122; mir-263

Literature search

2 open access papers mention aae-mir-263b
(3 sentences)

Sequence

4830 reads, 244 reads per million, 2 experiments

gaccaauuacgaacCUUGGCACUGGGAGAAUUCACAGgcgcuauuugcuaucauucugUGGAUCUUUUCGUGCCAUCGUuuaaauucgguc
((((((((..((((..((((((.((((((.((((((((.((.....))......)))))))))))))).))))))..)))).)))).))))

Structure

    -    ac    CU      U      A        -----c  u 
gacc aauu  gaac  UGGCAC GGGAGA UUCACAGg      gc a
|||| ||||  ||||  |||||| |||||| ||||||||      || u
cugg uuaa  uuUG  ACCGUG UUUUCU AGGUgucu      cg u
    c    -a    CU      C      -        uacuau  u 

Annotation confidence High

Genome context

supercont1.28: 2323832-2323922 [+]

Mature aae-miR-263b-5p

• Accession: MIMAT0014309
• Description: Aedes aegypti aae-miR-263b-5p mature miRNA
• Sequence: 15 - CUUGGCACUGGGAGAAUUCACAG - 37
• Evidence: experimental ; 454 [1]

Mature aae-miR-263b-3p

• Accession: MIMAT0014310
• Description: Aedes aegypti aae-miR-263b-3p mature miRNA
• Sequence: 59 - UGGAUCUUUUCGUGCCAUCGU - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581