Stem-loop aae-mir-2945

Accession

MI0013522

Description

Aedes aegypti aae-mir-2945 precursor miRNA

Gene family

MIPF0000184; mir-279

Literature search

2 open access papers mention aae-mir-2945
(3 sentences)

Sequence

317810 reads, 16290 reads per million, 2 experiments

ucugaucugAGCGGGUCCGUUUCUAGUGUCAUGugcuguauucgaauaucaUGACUAGAGGCAGACUCGUUUAggucuggga
(((((((((((((((((.(((((((..((((((................))))))))))))).)))))))))))))).))).

Structure

-   -              C       GU      ugcugua 
 ucu gaucugAGCGGGUC GUUUCUA  GUCAUG       u
 ||| |||||||||||||| |||||||  ||||||        
 ggg cuggAUUUGCUCAG CGGAGAU  CAGUac       u
a   u              A       --      uauaagc 

Annotation confidence High

Genome context

supercont1.43: 958687-958768 [+]

Mature aae-miR-2945-5p

• Accession: MIMAT0014315
• Description: Aedes aegypti aae-miR-2945-5p mature miRNA
• Sequence: 10 - AGCGGGUCCGUUUCUAGUGUCAUG - 33
• Evidence: experimental ; 454 [1]

Mature aae-miR-2945-3p

• Accession: MIMAT0014316
• Description: Aedes aegypti aae-miR-2945-3p mature miRNA
• Sequence: 52 - UGACUAGAGGCAGACUCGUUUA - 73
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581