miRBase entry: cqu-mir-1174

Stem-loop cqu-mir-1174


Accession
MI0013561
Description
Culex quinquefasciatus cqu-mir-1174 precursor miRNA

Literature search
1 open access papers mention cqu-mir-1174
(7 sentences)

Sequence

uuCUGGGUAUUUUAGAUCAUCGGCauaguuuagagaaugcgacgauuucuuccguacccagagg
((((((((((...(((..((((((((..........))))..)))).)))...)))))))))).

Structure
-          UUU   UC    --    aguu 
 uuCUGGGUAU   AGA  AUCG  GCau    u
 ||||||||||   |||  ||||  ||||     
 gagacccaug   ucu  uagc  cgua    a
g          ccu   -u    ag    agag 


Annotation confidence Not enough data
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Genome context
supercont3.86: 865899-865962 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cqu-mir-1174
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cqu-miR-1174

Accession MIMAT0014354
Description Culex quinquefasciatus cqu-miR-1174 mature miRNA
Sequence 3 - CUGGGUAUUUUAGAUCAUCGGC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119