Stem-loop cqu-mir-988

Accession

MI0013567

Description

Culex quinquefasciatus cqu-mir-988 precursor miRNA

Gene family

MIPF0000724; mir-988

Sequence

gacccgcugcgggUGUGUGCUUUGUGACAACGAGAuucagcuuugaaaucaucCCCUUGUUGCAAACCUCACGCuugcgguggggg
..(((((((((((((((.(.((((((((((.((((((((....)).)))).))...)))))))))).).)))))))))))))))..

Structure

ga               U C          --C  -    -  g 
  cccgcugcgggUGUG G UUUGUGACAA   GA GAuu ca c
  ||||||||||||||| | ||||||||||   || |||| ||  
  ggguggcguuCGCAC C AAACGUUGUU   cu cuaa gu u
gg               U C          CCC  a    a  u 

Annotation confidence Not enough data

Genome context

supercont3.791: 14278-14363 [+]

Mature cqu-miR-988-5p

• Accession: MIMAT0014362
• Description: Culex quinquefasciatus cqu-miR-988-5p mature miRNA
• Sequence: 14 - UGUGUGCUUUGUGACAACGAGA - 35
• Evidence: experimental ; Illumina [1]

Mature cqu-miR-988-3p

• Accession: MIMAT0014363
• Description: Culex quinquefasciatus cqu-miR-988-3p mature miRNA
• Sequence: 54 - CCCUUGUUGCAAACCUCACGC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119