Stem-loop sequence cqu-mir-278

Accession

MI0013578 (change log)

Description

Culex quinquefasciatus miR-278 stem-loop

Gene family

MIPF0000155; mir-278

Literature search

1 open access papers mention cqu-mir-278
(3 sentences)

Stem-loop

   aa  -u     cuu   -            u     u  g     gugccauuu 
5'   gu  cuggu   ggu gcggacggacga agucu ca cgacc         g
     ||  |||||   ||| |||||||||||| ||||| || |||||         a
3'   cg  gaccg   cca uguuugccugcu ucagg gu gcugg         a
   aa  uu     ---   a            u     -  g     guuucccaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CpipJ1): supercont3.16: 1026146-1026250 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013578

Mature sequence cqu-miR-278

• Accession: MIMAT0014377
• Sequence: 67 - ucggugggacuuucguccguuu - 88
• Evidence: experimental; Illumina [1]

References

1. PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).