Stem-loop cqu-mir-305

Accession

MI0013582

Description

Culex quinquefasciatus cqu-mir-305 precursor miRNA

Gene family

MIPF0000158; mir-305

Sequence

aaugucacaugucuAUUGUACUUCAUCAGGUGCUCUgguugcuuucgauaccCGGCACAUGUUGGAGUACACuuaaugugcugacagu
..((((((((((..(.(((((((((.((.(((((..(((..(....)..))).))))).)).))))))))).)..))))).)))))..

Structure

aa     -     cu U         U  G     CU   ug u 
  uguca caugu  A UGUACUUCA CA GUGCU  ggu  c u
  ||||| |||||  | ||||||||| || |||||  |||  |  
  acagu gugua  u ACAUGAGGU GU CACGG  cca  g u
ug     c     au C         U  A     -C   ua c 

Annotation confidence Not enough data

Genome context

supercont3.291: 339120-339207 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cqu-mir-305

Mature cqu-miR-305-5p

• Accession: MIMAT0014382
• Description: Culex quinquefasciatus cqu-miR-305-5p mature miRNA
• Sequence: 15 - AUUGUACUUCAUCAGGUGCUCU - 36
• Evidence: experimental ; Illumina [1]

Mature cqu-miR-305-3p

• Accession: MIMAT0014383
• Description: Culex quinquefasciatus cqu-miR-305-3p mature miRNA
• Sequence: 53 - CGGCACAUGUUGGAGUACAC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119