Stem-loop sequence cqu-mir-276-2

Accession

MI0013589 (change log)

Description

Culex quinquefasciatus miR-276-2 stem-loop

Gene family

MIPF0000124; mir-276

Literature search

1 open access papers mention cqu-mir-276-2
(3 sentences)

Stem-loop

   ---c  --gugg     gauu    uc    a     ag         --   g  a 
5'     gu      uuggu    gcca  agcg gguau  aguuccuac  guu cg g
       ||      |||||    ||||  |||| |||||  |||||||||  ||| ||  
3'     ca      agccg    cggu  ucgu ccaua  ucaaggaug  uaa gc u
   aaaa  acuuaa     --au    uc    g     cu         gc   a  u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CpipJ1): supercont3.136: 541130-541236 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013589

Mature sequence cqu-miR-276-5p

• Accession: MIMAT0014392
• Previous IDs: cqu-miR-276*
• Sequence: 23 - agcgagguauagaguuccu - 41
• Evidence: experimental; Illumina [1]

Mature sequence cqu-miR-276-3p

• Accession: MIMAT0014393
• Previous IDs: cqu-miR-276
• Sequence: 63 - uaggaacuucauaccgugcucu - 84
• Evidence: experimental; Illumina [1]

References

1. PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).