Stem-loop cqu-mir-276-3

Accession

MI0013590

Description

Culex quinquefasciatus cqu-mir-276-3 precursor miRNA

Gene family

MIPF0000124; mir-276

Literature search

1 open access papers mention cqu-mir-276-3
(3 sentences)

Sequence

caguuugaaaguucacccacuAGCGAGGUAUAGAGUUCCUaugcguuguuucgauucgcuauccaUAGGAACUUCAUACCGUGCUCUuggauggcuuuccguucaucaga
......((((((.((.(((..((((.(((((.(((((((((((.((.((........)).)).))))))))))).))))).))))..))).))))))))...........

Structure

-----caguuu      u  c   cu    A     A           c  u  uuc 
           gaaagu ca cca  AGCG GGUAU GAGUUCCUaug gu gu   g
           |||||| || |||  |||| ||||| ||||||||||| || ||    
           cuuucg gu ggu  UCGU CCAUA UUCAAGGAUac ua cg   a
agacuacuugc      -  a   UC    G     C           c  u  cuu 

Annotation confidence Not enough data

Genome context

supercont3.2457: 865-974 [+]

Mature cqu-miR-276-5p

• Accession: MIMAT0014392
• Description: Culex quinquefasciatus cqu-miR-276-5p mature miRNA
• Sequence: 22 - AGCGAGGUAUAGAGUUCCU - 40
• Evidence: experimental ; Illumina [1]

Mature cqu-miR-276-3p

• Accession: MIMAT0014393
• Description: Culex quinquefasciatus cqu-miR-276-3p mature miRNA
• Sequence: 66 - UAGGAACUUCAUACCGUGCUCU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119