Stem-loop sequence cqu-mir-210

Accession

MI0013592 (change log)

Description

Culex quinquefasciatus miR-210 stem-loop

Gene family

MIPF0000086; mir-210

Literature search

1 open access papers mention cqu-mir-210
(11 sentences)

Stem-loop

   cucauugc     c  ac   -         -   g 
5'         agcug ug  cac ugcacaaga uua a
           ||||| ||  ||| ||||||||| ||| u
3'         ucggc ac  gug gcguguucu agu u
   ----guua     a  -a   u         c   a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CpipJ1): supercont3.549: 157655-157722 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013592

Mature sequence cqu-miR-210-5p

• Accession: MIMAT0014396
• Previous IDs: cqu-miR-210*
• Sequence: 9 - agcugcugaccacugcacaaga - 30
• Evidence: experimental; Illumina [1]

Mature sequence cqu-miR-210-3p

• Accession: MIMAT0014397
• Previous IDs: cqu-miR-210
• Sequence: 44 - cuugugcgugugacaacggcuau - 66
• Evidence: experimental; Illumina [1]

References

1. PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).