Stem-loop cqu-mir-8

Accession

MI0013602

Description

Culex quinquefasciatus cqu-mir-8 precursor miRNA

Gene family

MIPF0000019; mir-8

Literature search

2 open access papers mention cqu-mir-8
(12 sentences)

Sequence

gucuguucaCAUCUUACCGGGCAGCAUUAGAuauuuuuuaaauacuucUAAUACUGUCAGGUAAAGAUGUcguccga
........((((((((((.(((((.(((((((((((...)))))..)))))).))))).))).))))))).......

Structure

gucuguuc       -   G     C      --     u 
        aCAUCUU ACC GGCAG AUUAGA  uauuu  
        ||||||| ||| ||||| ||||||  ||||| u
        UGUAGAA UGG CUGUC UAAUcu  auaaa  
-agccugc       A   A     A      uc     u 

Annotation confidence Not enough data

Genome context

supercont3.40: 815858-815934 [-]

Mature cqu-miR-8-5p

• Accession: MIMAT0014408
• Description: Culex quinquefasciatus cqu-miR-8-5p mature miRNA
• Sequence: 10 - CAUCUUACCGGGCAGCAUUAGA - 31
• Evidence: experimental ; Illumina [1]

Mature cqu-miR-8-3p

• Accession: MIMAT0014409
• Description: Culex quinquefasciatus cqu-miR-8-3p mature miRNA
• Sequence: 49 - UAAUACUGUCAGGUAAAGAUGU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119