Stem-loop sequence cqu-mir-1891

Accession

MI0013611 (change log)

Description

Culex quinquefasciatus miR-1891 stem-loop

Gene family

MIPF0000857; mir-1891

Literature search

2 open access papers mention cqu-mir-1891
(4 sentences)

Stem-loop

   --    uc        uga         uu        uug a 
5'   uuuu  ugucaugu   ggaguuaau  gcguguuu   c u
     ||||  ||||||||   |||||||||  ||||||||   |  
3'   aaaa  guaguaca   ucucaauua  ugcacaaa   g u
   cg    ua        ugg         cc        uua c 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CpipJ1): supercont3.829: 180333-180418 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013611

Mature sequence cqu-miR-1891

• Accession: MIMAT0014422
• Sequence: 15 - ugaggaguuaauuugcguguuu - 36
• Evidence: experimental; Illumina [1]

References

1. PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).