Stem-loop sequence cqu-mir-2951

Accession

MI0013621 (change log)

Description

Culex quinquefasciatus miR-2951 stem-loop

Literature search

1 open access papers mention cqu-mir-2951
(14 sentences)

Stem-loop

   -gg    -gc    c    a ----      -   ac 
5'    aaga   ucag acgc g    gggugg cgc  u
      ||||   |||| |||| |    |||||| |||  a
3'    uuuu   gguc ugug c    cccauc gcg  c
   cug    aaa    a    c uugg      u   cc 

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (CpipJ1)	Overlapping transcripts
supercont3.1464: 4408-4477 [+]	intergenic
supercont3.1464: 13130-13199 [+]	intergenic
supercont3.1464: 21931-22000 [+]	intergenic
supercont3.1464: 30698-30767 [+]	intergenic
supercont3.1464: 39499-39568 [+]	intergenic
supercont3.1464: 48275-48344 [+]	intergenic
supercont3.1464: 56986-57055 [+]	intergenic
supercont3.679: 54985-55054 [+]	intergenic

Database links

• miRBase Tracker:MI0013621

Mature sequence cqu-miR-2951-5p

• Accession: MIMAT0014432
• Previous IDs: cqu-miR-2951
• Sequence: 4 - agagcucagcacgcagggguggc - 26
• Evidence: experimental; Illumina [1]

Mature sequence cqu-miR-2951-3p

• Accession: MIMAT0014433
• Previous IDs: cqu-miR-2951*
• Sequence: 32 - acccgcgucuacccgguuccguguacuggaaau - 64
• Evidence: experimental; Illumina [1]

References

1. PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).