Stem-loop sequence cqu-mir-2952

AccessionMI0013624 (change log)
DescriptionCulex quinquefasciatus miR-2952 stem-loop
Literature search

1 open access papers mention cqu-mir-2952
(5 sentences)

Stem-loop 
   -ga   a      c     g       --   g 
5'    ucc caguca ggcug uacugca  uug c
      ||| |||||| ||||| |||||||  |||  
3'    ggg gucagu ccggc augaugu  agc u
   cuc   a      a     -       cu   a
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CpipJ1) Overlapping transcripts
supercont3.5: 753920-753983 [-]
intergenic
Clustered miRNAs
< 10kb from cqu-mir-2952
cqu-mir-2952supercont3.5: 753920-753983 [-]
cqu-mir-2941-2supercont3.5: 753788-753868 [-]
cqu-mir-2941-1supercont3.5: 753640-753706 [-]
Database links

Mature sequence cqu-miR-2952

Accession MIMAT0014436
Sequence

41 -  

uaguacggccaugacugagggc

 - 62

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).