Stem-loop sequence tgu-mir-2963

AccessionMI0013650 (change log)
DescriptionTaeniopygia guttata miR-2963 stem-loop
Literature search

1 open access papers mention tgu-mir-2963
(1 sentences)

Stem-loop 
       g  -    u   -g     -  a    u  g  c    uuggaa      ----        ga u      -c      g        g a 
5' ccag ag guuu ggg  uggcc uc ccuc ca ca ggau      uugagu    cacugggu  c ucccag  aucccu uuuccuuu g u
   |||| || |||| |||  ||||| || |||| || || ||||      ||||||    ||||||||  | ||||||  |||||| |||||||| |  
3' gguc uc cgag ccu  gccgg gg ggag gu gu ucug      aacucg    gugacuua  g aggguu  uaggga aaaggagg c c
       g  g    u   ag     u  a    -  g  -    -uagga      agcu        ga u      uu      -        g u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (taeGlu3.2.4) Overlapping transcripts
chr22_random: 503984-504165 [+]
intergenic
Database links

Mature sequence tgu-miR-2963-5p

Accession MIMAT0026961
Sequence

61 -  

acuucccagcaucccuguuucc

 - 82

Get sequence
Evidence experimental; Illumina [2]

Mature sequence tgu-miR-2963-3p

Accession MIMAT0014463
Sequence

99 -  

aaaagggauuuuugggaugaga

 - 120

Get sequence
Evidence experimental; Illumina [1-2]

References

1
PMID:20360741 "The genome of a songbird" Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li Nature. 464:757-762(2010).
2
PMID:23268654 "Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression" Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X BMC Genomics. 13:727(2012).