Stem-loop api-mir-3022

Accession

MI0013965

Description

Acyrthosiphon pisum api-mir-3022 precursor miRNA

Sequence

UCUCGUUAUAUCUGACGUCGGGGAAugguauauauaccagaacuccagcguagauacucgaugcg
..(((...((((((.(((.((((..(((((....)))))...)))).)))))))))..)))....

Structure

--UC   UUA      A   C    -AA     u 
    UCG   UAUCUG CGU GGGG   uggua a
    |||   |||||| ||| ||||   |||||  
    agc   auagau gcg ccuc   accau u
gcgu   -uc      -   a    aag     a 

Annotation confidence Low

Genome context

GL349928.1: 465371-465435 [+]

Mature api-miR-3022

• Accession: MIMAT0014758
• Description: Acyrthosiphon pisum api-miR-3022 mature miRNA
• Sequence: 1 - UCUCGUUAUAUCUGACGUCGGGGAA - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281