miRBase entry: hsa-mir-548s

Stem-loop hsa-mir-548s


Accession
MI0014141
Symbol
HGNC: MIR548S
Description
Homo sapiens hsa-mir-548s precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
42 open access papers mention hsa-mir-548s
(143 sentences)

Sequence

360 reads, 36 reads per million, 52 experiments
uugcugcaaaaauaauugcaguuuuugccauuauuuuuaauaauuauaauaAUGGCCAAAACUGCAGUUAUUUUugcaccaa
.((.(((((((((((((((((((((.(((((((((............))))))))).))))))))))))))))))))).)).

Structure
u  c                     u         uuuaa 
 ug ugcaaaaauaauugcaguuuu gccauuauu     u
 || ||||||||||||||||||||| |||||||||      
 ac acguUUUUAUUGACGUCAAAA CGGUAauaa     a
a  c                     C         uauua 


Annotation confidence Not enough data
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Genome context
chr2: 11767444-11767525 [+]

Disease association
hsa-mir-548s is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-548s

Accession MIMAT0014987
Description Homo sapiens hsa-miR-548s mature miRNA
Sequence 52 - AUGGCCAAAACUGCAGUUAUUUU - 74
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685