miRBase entry: 20300190

Characterization of the Melanoma miRNAome by Deep Sequencing

PubMed ID 20300190
Authors "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
Journal "PLoS One
Volume 5
Pages e9685

There are 124 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
hsa-mir-1537 MI0007258 146 chr1 235853000 235853060 - High
hsa-mir-3115 MI0014127 12 chr1 23044305 23044372 + -
hsa-mir-3116-1 MI0014128 8 chr1 62078786 62078859 + -
hsa-mir-3116-2 MI0014129 8 chr1 62078789 62078856 - -
hsa-mir-3117 MI0014130 24 chr1 66628440 66628517 + -
hsa-mir-3118-1 MI0014131 3 chr21 13644775 13644850 - -
hsa-mir-3118-2 MI0014132 3 chr15 20832795 20832869 + -
hsa-mir-3118-3 MI0014133 3 chr15 21406385 21406459 + -
hsa-mir-3119-1 MI0014134 4 chr1 170151378 170151462 - -
hsa-mir-3119-2 MI0014135 6 chr1 170151378 170151462 + -
hsa-mir-3120 MI0014136 35 chr1 172138808 172138888 + -
hsa-mir-3121 MI0014137 7 chr1 180438314 180438390 - -
hsa-mir-3122 MI0014138 5 chr1 212077613 212077685 + -
hsa-mir-3123 MI0014139 33 chr1 241132272 241132346 + -
hsa-mir-3124 MI0014140 14 chr1 248826377 248826443 + -
hsa-mir-548s MI0014141 36 chr2 11767444 11767525 + -
hsa-mir-3125 MI0014142 7 chr2 12737367 12737444 + -
hsa-mir-3126 MI0014143 18 chr2 69103682 69103755 + High
hsa-mir-3127 MI0014144 23 chr2 96798278 96798353 + High
hsa-mir-3128 MI0014145 13 chr2 177255945 177256010 - -
hsa-mir-3129 MI0014146 36 chr2 189133036 189133111 - -
hsa-mir-3130-1 MI0014147 118 chr2 206783234 206783308 - High
hsa-mir-3130-2 MI0014148 126 chr2 206783234 206783308 + High
hsa-mir-3131 MI0014151 12 chr2 219058688 219058750 - -
hsa-mir-3132 MI0014152 9 chr2 219549073 219549147 - -
hsa-mir-3133 MI0014153 26 chr2 241477905 241477982 + -
hsa-mir-378b MI0014154 37 chr3 10330229 10330285 + -
hsa-mir-3134 MI0014155 221 chr3 15697298 15697371 - -
hsa-mir-3135a MI0014156 1516 chr3 20137565 20137641 + -
hsa-mir-466 MI0014157 26 chr3 31161704 31161787 - -
hsa-mir-3136 MI0014158 13 chr3 69048958 69049035 - -
hsa-mir-544b MI0014159 7 chr3 124732439 124732516 + -
hsa-mir-3137 MI0014160 6 chr3 195134506 195134580 - -
hsa-mir-3138 MI0014161 31 chr4 10078611 10078692 - -
hsa-mir-3139 MI0014162 8 chr4 143343460 143343535 + -
hsa-mir-3140 MI0014163 35 chr4 152489327 152489416 - High
hsa-mir-548t MI0014164 104 chr4 173268160 173268233 + -
hsa-mir-3141 MI0014165 12 chr5 154596012 154596072 - -
hsa-mir-3142 MI0014166 5 chr5 160474402 160474483 + -
hsa-mir-3143 MI0014167 26 chr6 27147626 27147688 + -
hsa-mir-548u MI0014168 33 chr6 57390132 57390212 + -
hsa-mir-3144 MI0014169 34 chr6 120015179 120015257 + High
hsa-mir-3145 MI0014170 19 chr6 138435213 138435294 - High
hsa-mir-1273c MI0014171 576 chr6 154853360 154853436 + -
hsa-mir-3146 MI0014172 12 chr7 19705358 19705436 - -
hsa-mir-3147 MI0014173 52 chr7 57405025 57405090 + -
hsa-mir-548v MI0014174 74 chr8 17681578 17681657 - -
hsa-mir-3148 MI0014175 4 chr8 29957272 29957348 - -
hsa-mir-3149 MI0014176 136 chr8 76966768 76966850 - -
hsa-mir-3150a MI0014177 28 chr8 95072914 95072993 + -
hsa-mir-3151 MI0014178 13 chr8 103154614 103154689 + -
hsa-mir-3152 MI0014179 8 chr9 18573306 18573379 + -
hsa-mir-3153 MI0014180 9 chr9 89312225 89312306 + -
hsa-mir-3074 MI0014181 38 chr9 95086014 95086094 - -
hsa-mir-3154 MI0014182 56 chr9 128244947 128245030 - -
hsa-mir-3155a MI0014183 23 chr10 6152196 6152277 + -
hsa-mir-3156-1 MI0014184 9 chr10 45164014 45164088 + -
hsa-mir-3157 MI0014185 35 chr10 96064315 96064399 - High
hsa-mir-3158-1 MI0014186 99 chr10 101601417 101601497 + High
hsa-mir-3158-2 MI0014187 97 chr10 101601417 101601497 - High
hsa-mir-3159 MI0014188 2549 chr11 18387787 18387860 + Low
hsa-mir-3160-1 MI0014189 18 chr11 46451805 46451889 - -
hsa-mir-3160-2 MI0014190 18 chr11 46451807 46451887 + -
hsa-mir-3161 MI0014191 8 chr11 48096782 48096858 + -
hsa-mir-3162 MI0014192 13 chr11 59595077 59595158 - -
hsa-mir-3163 MI0014193 6 chr11 66934434 66934506 - -
hsa-mir-3164 MI0014194 15 chr11 69083176 69083258 + -
hsa-mir-3165 MI0014195 70 chr11 72072228 72072302 - -
hsa-mir-3166 MI0014196 20 chr11 88176502 88176593 + -
hsa-mir-1260b MI0014197 91 chr11 96341438 96341526 + -
hsa-mir-3167 MI0014198 5 chr11 126988458 126988542 - -
hsa-mir-3168 MI0014199 6 chr13 41101019 41101100 - -
hsa-mir-3169 MI0014200 6 chr13 61199798 61199880 - -
hsa-mir-3170 MI0014201 6 chr13 98208524 98208600 + -
hsa-mir-3171 MI0014202 11 chr14 27633205 27633278 - -
hsa-mir-3173 MI0014204 473 chr14 95137919 95137986 - High
hsa-mir-1193 MI0014205 4 chr14 101030052 101030129 + -
hsa-mir-323b MI0014206 21 chr14 101056219 101056300 + High
hsa-mir-3118-4 MI0014207 3 chr15 21843750 21843824 + -
hsa-mir-3174 MI0014208 23 chr15 90006755 90006841 + -
hsa-mir-3175 MI0014209 10 chr15 92904399 92904475 + -
hsa-mir-3176 MI0014210 43 chr16 543277 543366 + -
hsa-mir-3177 MI0014211 34 chr16 1734985 1735066 + High
hsa-mir-3178 MI0014212 46 chr16 2531922 2532005 - -
hsa-mir-3179-1 MI0014213 25 chr16 14901508 14901591 + -
hsa-mir-3180-1 MI0014214 123 chr16 14911220 14911313 + High
hsa-mir-3180-2 MI0014215 123 chr16 16309879 16309966 + High
hsa-mir-3179-2 MI0014216 25 chr16 16300159 16300242 + -
hsa-mir-3180-3 MI0014217 123 chr16 18402178 18402271 - High
hsa-mir-3179-3 MI0014221 25 chr16 18411894 18411977 - -
hsa-mir-548w MI0014222 94 chr16 26025237 26025310 + -
hsa-mir-3181 MI0014223 9 chr16 50742305 50742377 + -
hsa-mir-3182 MI0014224 59 chr16 83508346 83508408 + -
hsa-mir-3183 MI0014225 7 chr17 1022476 1022559 - -
hsa-mir-3184 MI0014226 18 chr17 30117086 30117160 - -
hsa-mir-3185 MI0014227 8 chr17 48724408 48724475 - -
hsa-mir-3065 MI0014228 224 chr17 81125877 81125955 + High
hsa-mir-3186 MI0014229 15 chr17 81451104 81451188 - -
hsa-mir-3156-2 MI0014230 9 chr18 14830166 14830242 + -
hsa-mir-3187 MI0014231 26 chr19 813584 813653 + High
hsa-mir-3188 MI0014232 36 chr19 18282077 18282161 + -
hsa-mir-3189 MI0014233 12 chr19 18386562 18386634 + High
hsa-mir-320e MI0014234 155 chr19 46709282 46709354 - -
hsa-mir-3190 MI0014235 33 chr19 47226942 47227021 + -
hsa-mir-3191 MI0014236 8 chr19 47226944 47227019 - -
hsa-mir-3192 MI0014237 11 chr20 18470615 18470691 + -
hsa-mir-3193 MI0014238 7 chr20 31607186 31607240 + -
hsa-mir-3194 MI0014239 17 chr20 51452905 51452977 - High
hsa-mir-3195 MI0014240 15 chr20 62064802 62064885 + -
hsa-mir-3196 MI0014241 23 chr20 63238779 63238842 + -
hsa-mir-3156-3 MI0014242 8 chr21 13406384 13406460 - -
hsa-mir-548x MI0014244 59 chr21 18686090 18686164 - High
hsa-mir-3197 MI0014245 13 chr21 41167557 41167629 + -
hsa-mir-3198-1 MI0014246 19 chr22 17764180 17764259 - -
hsa-mir-3199-1 MI0014247 70 chr22 27920525 27920612 - -
hsa-mir-3199-2 MI0014248 73 chr22 27920526 27920611 + Low
hsa-mir-3200 MI0014249 69 chr22 30731557 30731641 + High
hsa-mir-3201 MI0014250 1 chr22 48274364 48274415 + -
hsa-mir-514b MI0014251 114 chrX 147250151 147250230 - High
hsa-mir-3202-1 MI0014252 59 chrX 153981097 153981177 + -
hsa-mir-3202-2 MI0014253 57 chrX 153981098 153981176 - -
hsa-mir-1273d MI0014254 None None None -
hsa-mir-3198-2 MI0017335 20 chr12 54231397 54231476 - -
hsa-mir-3179-4 MI0031510 25 chr16 18494493 18494576 - -



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