Stem-loop hsa-mir-3190

Accession

MI0014235

Symbol

HGNC: MIR3190

Description

Homo sapiens hsa-mir-3190 precursor miRNA mir-3190

Gene
family

RF03844; mir-3190

Literature search

2 open access papers mention hsa-mir-3190
(2 sentences)

Sequence

696 reads, 6 reads per million, 45 experiments

cuggggucaccugUCUGGCCAGCUACGUCCCCAcggcccuugucagUGUGGAAGGUAGACGGCCAGAGAggugaccccgg
((((((((((((.(((((((..((((.(((.((((((....))).))).)))..))))..))))))).))))))))))))

Structure

            g       AG    -G   C   -   c 
cuggggucaccu UCUGGCC  CUAC  UCC CAc ggc c
|||||||||||| |||||||  ||||  ||| ||| |||  
ggccccaguggA AGACCGG  GAUG  AGG GUg cug u
            G       CA    GA   U   a   u 

Annotation confidence Not enough data

Genome context

chr19: 47226942-47227021 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3190

Mature hsa-miR-3190-5p

• Accession: MIMAT0015073
• Description: Homo sapiens hsa-miR-3190-5p mature miRNA
• Sequence: 14 - UCUGGCCAGCUACGUCCCCA - 33
• Evidence: experimental ; Illumina [2]

Mature hsa-miR-3190-3p

• Accession: MIMAT0022839
• Description: Homo sapiens hsa-miR-3190-3p mature miRNA
• Sequence: 47 - UGUGGAAGGUAGACGGCCAGAGA - 69
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 21606961
   Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
   "Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML"
   "Leukemia (2011) 25:1389-1399