Stem-loop hsa-mir-3198-1

Accession

MI0014246

Symbol

HGNC: MIR3198-1

Description

Homo sapiens hsa-mir-3198-1 precursor miRNA mir-3198

Gene
family

RF03418; mir-3198

Literature search

1 open access papers mention hsa-mir-3198-1
(1 sentences)

Sequence

109 reads, 19 reads per million, 32 experiments

gacugugcucucacuguucacccagcacuagcaguaccagacgguucuGUGGAGUCCUGGGGAAUGGAGAgagcacaguc
((((((((((((.((((((.(((((.(((.((((.(((....))).))))..))).))))))))))).))))))))))))

Structure

            a      a     c   -a    u   a 
gacugugcucuc cuguuc cccag acu  gcag acc g
|||||||||||| |||||| ||||| |||  |||| |||  
cugacacgagAG GGUAAG GGGUC UGA  UGuc ugg a
            A      -     C   GG    u   c 

Annotation confidence Not enough data

Genome context

chr22: 17764180-17764259 [-]

Mature hsa-miR-3198

• Accession: MIMAT0015083
• Description: Homo sapiens hsa-miR-3198 mature miRNA
• Sequence: 49 - GUGGAGUCCUGGGGAAUGGAGA - 70
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86