Stem-loop hsa-mir-3176

Accession

MI0014210

Symbol

HGNC: MIR3176

Description

Homo sapiens hsa-mir-3176 precursor miRNA

Literature search

2 open access papers mention hsa-mir-3176
(2 sentences)

Sequence

3084 reads, 15.0 reads per million, 113 experiments

uggccuCUCCAGUCUGCAGCUCCCggcagccucgggccacacucccgggauccccagggACUGGCCUGGGACUACCGGggguggcggccg
.((((..........((.((((((((.((.(((((((((...(((((((...))).)))).))))))))).)).)))))))).)))))).

Structure

u    uCUCCAGUCU  A        c  c         cac    -   a 
 ggcc          GC GCUCCCgg ag cucgggcca   uccc ggg  
 ||||          || |||||||| || |||||||||   |||| ||| u
 ccgg          cg ugggGGCC UC GGGUCCGGU   Aggg ccc  
g    ----------  g        A  A         --C    a   c 

Annotation confidence Medium

Genome context

chr16: 543277-543366 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3176

Disease association

hsa-mir-3176 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-3176-5p

• Accession: MIMAT0050574
• Description: Homo sapiens hsa-miR-3176-5p mature miRNA
• Sequence: 7 - CUCCAGUCUGCAGCUCCC - 24
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-3176-3p

• Accession: MIMAT0015053
• Description: Homo sapiens hsa-miR-3176-3p mature miRNA
• Sequence: 60 - ACUGGCCUGGGACUACCGG - 78
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86