Stem-loop hsa-mir-1273c

Accession

MI0014171

Symbol

HGNC: MIR1273C

Description

Homo sapiens hsa-mir-1273c precursor miRNA

Literature search

9 open access papers mention hsa-mir-1273c
(42 sentences)

Sequence

4922 reads, 18.0 reads per million, 178 experiments

ugcagccugGGCGACAAAACGAGACCCUGUCuuuuuuuuuuucugagaCAGAGUCUCGUUCUGUUGCCCaagcugga
..((((.(((((((((.((((((((.(((((((...........))))))).)))))))).))))))))).))))..

Structure

ug    c         A        C       uuuu 
  cagc ugGGCGACA AACGAGAC CUGUCuu    u
  |||| ||||||||| |||||||| |||||||    u
  gucg aCCCGUUGU UUGCUCUG GACagag    u
ag    a         C        A       ucuu 

Annotation confidence High

Genome context

chr6: 154853360-154853436 [+]

Mature hsa-miR-1273c-5p

• Accession: MIMAT0015017
• Description: Homo sapiens hsa-miR-1273c-5p mature miRNA
• Sequence: 10 - GGCGACAAAACGAGACCCUGUC - 31
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-1273c-3p

• Accession: MIMAT0050562
• Description: Homo sapiens hsa-miR-1273c-3p mature miRNA
• Sequence: 49 - CAGAGUCUCGUUCUGUUGCCC - 69
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637