Discovery of novel microRNAs in female reproductive tract using next generation sequencing |
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PubMed ID | 20224791 |
Authors | Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH |
Journal | PLoS One |
Volume | 5 |
Pages | e9637 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
---|---|---|---|---|---|---|---|
hsa-mir-1908 | MI0008329 | 79 | chr11 | 61815161 | 61815240 | - | - |
hsa-mir-2114 | MI0010633 | 36 | chrX | 150228004 | 150228083 | + | High |
hsa-mir-2115 | MI0010634 | 17 | chr3 | 48316360 | 48316459 | - | High |
hsa-mir-2277 | MI0011284 | 52 | chr5 | 93620696 | 93620788 | - | High |
hsa-mir-3116-2 | MI0014129 | 8 | chr1 | 62078789 | 62078856 | - | - |
hsa-mir-3121 | MI0014137 | 7 | chr1 | 180438314 | 180438390 | - | - |
hsa-mir-3124 | MI0014140 | 14 | chr1 | 248826377 | 248826443 | + | - |
hsa-mir-3126 | MI0014143 | 18 | chr2 | 69103682 | 69103755 | + | High |
hsa-mir-3129 | MI0014146 | 36 | chr2 | 189133036 | 189133111 | - | - |
hsa-mir-3130-1 | MI0014147 | 118 | chr2 | 206783234 | 206783308 | - | High |
hsa-mir-3130-2 | MI0014148 | 126 | chr2 | 206783234 | 206783308 | + | High |
hsa-mir-3138 | MI0014161 | 31 | chr4 | 10078611 | 10078692 | - | - |
hsa-mir-3140 | MI0014163 | 35 | chr4 | 152489327 | 152489416 | - | High |
hsa-mir-3144 | MI0014169 | 34 | chr6 | 120015179 | 120015257 | + | High |
hsa-mir-1273c | MI0014171 | 576 | chr6 | 154853360 | 154853436 | + | - |
hsa-mir-3149 | MI0014176 | 136 | chr8 | 76966768 | 76966850 | - | - |
hsa-mir-3152 | MI0014179 | 8 | chr9 | 18573306 | 18573379 | + | - |
hsa-mir-3158-1 | MI0014186 | 99 | chr10 | 101601417 | 101601497 | + | High |
hsa-mir-3158-2 | MI0014187 | 97 | chr10 | 101601417 | 101601497 | - | High |
hsa-mir-3167 | MI0014198 | 5 | chr11 | 126988458 | 126988542 | - | - |
hsa-mir-3171 | MI0014202 | 11 | chr14 | 27633205 | 27633278 | - | - |
hsa-mir-3175 | MI0014209 | 10 | chr15 | 92904399 | 92904475 | + | - |
hsa-mir-3179-1 | MI0014213 | 25 | chr16 | 14901508 | 14901591 | + | - |
hsa-mir-3180-1 | MI0014214 | 123 | chr16 | 14911220 | 14911313 | + | High |
hsa-mir-3186 | MI0014229 | 15 | chr17 | 81451104 | 81451188 | - | - |
hsa-mir-3200 | MI0014249 | 69 | chr22 | 30731557 | 30731641 | + | High |
hsa-mir-514b | MI0014251 | 114 | chrX | 147250151 | 147250230 | - | High |
hsa-mir-2355 | MI0015873 | 107 | chr2 | 207109987 | 207110073 | - | - |
hsa-mir-3605 | MI0015995 | 62 | chr1 | 33332393 | 33332492 | - | High |
hsa-mir-3679 | MI0016080 | 18 | chr2 | 134127125 | 134127192 | + | - |
hsa-mir-3689a | MI0016090 | 7 | chr9 | 134849487 | 134849564 | - | - |
hsa-mir-3180-4 | MI0016408 | 103 | chr16 | 15154850 | 15155002 | - | - |
hsa-mir-3180-5 | MI0016409 | 103 | chr16 | 2135977 | 2136129 | - | - |
hsa-mir-3907 | MI0016410 | 360 | chr7 | 151433489 | 151433639 | - | - |
hsa-mir-3689b | MI0016411 | 5 | chr9 | 134850125 | 134850272 | - | - |
hsa-mir-3908 | MI0016412 | 66 | chr12 | 123536409 | 123536534 | + | - |
hsa-mir-3909 | MI0016413 | 38 | chr22 | 35335640 | 35335758 | + | - |
hsa-mir-3910-1 | MI0016414 | 30 | chr9 | 91636251 | 91636361 | + | - |
hsa-mir-3911 | MI0016415 | 11 | chr9 | 127690687 | 127690795 | - | - |
hsa-mir-3912 | MI0016416 | 61 | chr5 | 171386656 | 171386760 | - | Low |
hsa-mir-3913-1 | MI0016417 | 77 | chr12 | 69584722 | 69584823 | - | - |
hsa-mir-3913-2 | MI0016418 | 75 | chr12 | 69584723 | 69584822 | + | - |
hsa-mir-3914-1 | MI0016419 | 6 | chr7 | 71307672 | 71307770 | - | - |
hsa-mir-3915 | MI0016420 | 9 | chrX | 32583656 | 32583752 | - | - |
hsa-mir-3914-2 | MI0016421 | 4 | chr7 | 71307674 | 71307768 | + | - |
hsa-mir-3916 | MI0016422 | 346 | chr1 | 247201967 | 247202060 | - | - |
hsa-mir-3917 | MI0016423 | 55 | chr1 | 25906362 | 25906454 | - | - |
hsa-mir-3918 | MI0016424 | 6 | chr6 | 158764661 | 158764753 | - | - |
hsa-mir-3919 | MI0016425 | 4 | chr3 | 159282646 | 159282734 | + | - |
hsa-mir-3150b | MI0016426 | 54 | chr8 | 95072911 | 95072996 | - | - |
hsa-mir-3920 | MI0016427 | 1 | chr11 | 101519820 | 101519905 | - | - |
hsa-mir-3921 | MI0016428 | 5 | chr3 | 99964314 | 99964398 | - | - |
hsa-mir-3922 | MI0016429 | 17 | chr12 | 104591633 | 104591716 | + | - |
hsa-mir-3923 | MI0016430 | 7 | chr3 | 79507887 | 79507969 | + | - |
hsa-mir-3910-2 | MI0016431 | 30 | chr9 | 91636264 | 91636345 | - | - |
hsa-mir-3924 | MI0016432 | 1 | chr10 | 57304479 | 57304559 | - | - |
hsa-mir-3925 | MI0016433 | 4 | chr6 | 36622436 | 36622512 | - | - |
hsa-mir-3926-1 | MI0016434 | 17 | chr8 | 12727232 | 12727304 | - | - |
hsa-mir-3927 | MI0016435 | 3 | chr9 | 109511475 | 109511545 | - | - |
hsa-mir-676 | MI0016436 | 25 | chrX | 70022857 | 70022923 | + | High |
hsa-mir-3926-2 | MI0016437 | 17 | chr8 | 12727237 | 12727299 | + | - |
hsa-mir-3928 | MI0016438 | 72 | chr22 | 31160062 | 31160119 | - | High |
hsa-mir-3929 | MI0016439 | 697 | chr18 | 35934088 | 35934142 | - | - |
hsa-mir-2682 | MI0012063 | 23 | chr1 | 98045242 | 98045351 | - | - |
hsa-let-7a-1 | MI0000060 | 46519 | chr9 | 94175957 | 94176036 | + | High |
hsa-let-7a-2 | MI0000061 | 46265 | chr11 | 122146522 | 122146593 | - | High |
hsa-let-7a-3 | MI0000062 | 46706 | chr22 | 46112749 | 46112822 | + | High |
hsa-let-7b | MI0000063 | 27396 | chr22 | 46113686 | 46113768 | + | High |
hsa-let-7c | MI0000064 | 15711 | chr21 | 16539828 | 16539911 | + | High |
hsa-let-7d | MI0000065 | 4366 | chr9 | 94178834 | 94178920 | + | High |
hsa-let-7e | MI0000066 | 5118 | chr19 | 51692786 | 51692864 | + | High |
hsa-let-7f-1 | MI0000067 | 65280 | chr9 | 94176347 | 94176433 | + | High |
hsa-let-7f-2 | MI0000068 | 65395 | chrX | 53557192 | 53557274 | - | High |
hsa-mir-15a | MI0000069 | 3371 | chr13 | 50049119 | 50049201 | - | High |
hsa-mir-100 | MI0000102 | 1446 | chr11 | 122152229 | 122152308 | - | High |
hsa-mir-183 | MI0000273 | 635 | chr7 | 129774905 | 129775014 | - | High |
hsa-mir-203a | MI0000283 | 725 | chr14 | 104117405 | 104117514 | + | High |
hsa-let-7g | MI0000433 | 6904 | chr3 | 52268278 | 52268361 | - | High |
hsa-let-7i | MI0000434 | 7403 | chr12 | 62603686 | 62603769 | + | High |
hsa-mir-15b | MI0000438 | 5285 | chr3 | 160404588 | 160404685 | + | High |
hsa-mir-371a | MI0000779 | 12 | chr19 | 53787675 | 53787741 | + | - |
hsa-mir-1301 | MI0003815 | 206 | chr2 | 25328640 | 25328721 | - | High |
hsa-mir-203b | MI0017343 | 6 | chr14 | 104117418 | 104117503 | - | - |
hsa-mir-371b | MI0017393 | 5 | chr19 | 53787677 | 53787742 | - | - |