Stem-loop hsa-mir-3689a

Accession

MI0016090

Symbol

HGNC: MIR3689A

Description

Homo sapiens hsa-mir-3689a precursor miRNA

Literature search

1 open access papers mention hsa-mir-3689a
(1 sentences)

Sequence

97 reads, 4 reads per million, 6 experiments

ccugggaggUGUGAUAUCAUGGUUCCUGGGAggugugauccugugcuucCUGGGAGGUGUGAUAUCGUGGUuccuggg
((((((((.((((((((((((.(((((((((((((........))))))))))))).)))))))))))).))))))))

Structure

        g            G             uga 
ccugggag UGUGAUAUCAUG UUCCUGGGAggug   u
|||||||| |||||||||||| |||||||||||||    
ggguccuU GUGCUAUAGUGU GAGGGUCcuucgu   c
        G            G             guc 

Annotation confidence Not enough data

Genome context

chr9: 134849487-134849564 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from hsa-mir-3689a

Mature hsa-miR-3689a-5p

• Accession: MIMAT0018117
• Description: Homo sapiens hsa-miR-3689a-5p mature miRNA
• Sequence: 10 - UGUGAUAUCAUGGUUCCUGGGA - 31
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-3689a-3p

• Accession: MIMAT0018118
• Description: Homo sapiens hsa-miR-3689a-3p mature miRNA
• Sequence: 50 - CUGGGAGGUGUGAUAUCGUGGU - 71
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637


2. PubMed ID: 20459673
   Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood
   Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A
   BMC Genomics (2010) 11:288